Brigham and Women's Hospital
Bioinformatician I Channing Lab
Brigham and Women's Hospital, Boston, Massachusetts, us, 02298
The Channing Division of Network Medicine at Brigham and Women's Hospital, Boston is looking for exceptional candidates to join the Bioinformatics Core. The core involves a wide variety of data management challenges of complex data sets, including genomic scale next-generation sequencing data and data processing or curation. Our projects involve interrogation of the genome, transcriptome, and epigenome data utilizing machine learning analysis tools and data analysis pipelines.
The Bioinformatician will be developing and supporting the complex bioinformatics infrastructure needed for the wide range of data collection, transformation of data, and analysis requirements that will integrate across a wide range of skills and techniques. The Bioinformatician is required to design, create, and support tools and software analysis pipelines including secure dissemination of information generated.
Qualifications MS in Bioinformatics, Computer Science, or Biological Engineering; applicants will have an understanding of programming with agile development methods. SKILLS/ABILITIES/COMPETENCIES Ability to apply statistical and machine learning techniques to solve 'big data' problems. Experience in programming with
R
and
Python
[Pandas]. Understanding the use of bioinformatics tools including common NGS tools [BWA, samtools, GATK]. Understanding the use of bioinformatics tools including common OMICs Data [DNA, RNA, methylation, 16S, metabolomics]. Experience with databases (Postgres) and DB design. Experience with ETL procedures. Familiarity with Docker, Kubernetes, Snakemake, or Nextflow. Ability to work in a highly collaborative and intellectually challenging environment. Perform technology watch; contribute to the strategy and evolution of existing services, as well as future architecture evolution around communication platforms. Knowledge of Linux (Ubuntu). Must work independently. Excellent oral and written communication skills.
Additional Job Description The Brigham and Women's Hospital, Inc. is an Equal Opportunity Employer. By embracing diverse skills, perspectives, and ideas, we choose to lead. All qualified applicants will receive consideration for employment without regard to race, color, religious creed, national origin, sex, age, gender identity, disability, sexual orientation, military service, genetic information, and/or other status protected under law. We will ensure that all individuals with a disability are provided a reasonable accommodation to participate in the job application or interview process, to perform essential job functions, and to receive other benefits and privileges of employment.
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Qualifications MS in Bioinformatics, Computer Science, or Biological Engineering; applicants will have an understanding of programming with agile development methods. SKILLS/ABILITIES/COMPETENCIES Ability to apply statistical and machine learning techniques to solve 'big data' problems. Experience in programming with
R
and
Python
[Pandas]. Understanding the use of bioinformatics tools including common NGS tools [BWA, samtools, GATK]. Understanding the use of bioinformatics tools including common OMICs Data [DNA, RNA, methylation, 16S, metabolomics]. Experience with databases (Postgres) and DB design. Experience with ETL procedures. Familiarity with Docker, Kubernetes, Snakemake, or Nextflow. Ability to work in a highly collaborative and intellectually challenging environment. Perform technology watch; contribute to the strategy and evolution of existing services, as well as future architecture evolution around communication platforms. Knowledge of Linux (Ubuntu). Must work independently. Excellent oral and written communication skills.
Additional Job Description The Brigham and Women's Hospital, Inc. is an Equal Opportunity Employer. By embracing diverse skills, perspectives, and ideas, we choose to lead. All qualified applicants will receive consideration for employment without regard to race, color, religious creed, national origin, sex, age, gender identity, disability, sexual orientation, military service, genetic information, and/or other status protected under law. We will ensure that all individuals with a disability are provided a reasonable accommodation to participate in the job application or interview process, to perform essential job functions, and to receive other benefits and privileges of employment.
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